The Zika virus (ZIKV) is a mosquito-borne pathogen recently linked to birth defects in infants. At the ALS, researchers have resolved the structure of a key ZIKV protein to 3.0 Å, an important step toward the rational design of drugs capable of disrupting viral functions and halting the spread of the disease. Read more »
ALS Work Using Protein Crystallography
Protein crystallography is used for determining the molecular structure of proteins. Crystallized protein molecules cause a beam of incident x-rays to scatter in many directions, with constructive and destructive interference generating a diffraction pattern. By analyzing these patterns, a crystallographer can produce a three-dimensional picture of the density of electrons within the crystal and thus determine the protein's structure.
Study Sheds Light on How Bacterial Organelles Assemble
Scientists are providing the clearest view yet of an intact bacterial microcompartment (BMC), revealing the polyhedral structure and assembly of this organelle’s protein shell. Having the full structure can help provide important information in fighting pathogens or bioengineering bacterial organelles for beneficial purposes. Read more »
Bending the (β-Sheet) Curve to Shape Protein Cavities
Curved β sheets are basic building blocks of many protein cavities that, by serving as binding sites for other molecules, are essential to protein function. β-sheet curvature can now be controlled with atomic-level accuracy, opening the door to custom-designed sites capable of entirely new functions. Read more »
Researchers Gain Insight into Protein Critical to Zika Virus Reproduction
Zika virus is a mosquito-borne infectious disease linked to certain birth defects in infants. Scientists have mapped a key viral protein called NS5, which contains two enzymes: one reduces the body’s ability to mount an immune response against infection and the other helps start the genetic replication process. Read more »
Could This Enzyme Help Turn Biofuel Waste into Something Useful?
A protein used by common soil bacteria is providing new clues in the effort to convert aryl compounds, a common waste product from industrial and agricultural practices, into something of value. This Joint BioEnergy Institute (JBEI) study, which involved ALS Beamline 8.2.2, targets LigM for its role in breaking down aromatic pollutants. Read more »
NCAA Drives Formation of Designed Proteins
A noncanonical amino-acid (NCAA) complex has been found to drive the self-assembly of a computationally designed protein. Bpy-ala, which is “noncanonical” because it’s not among the 20 amino acids that occur naturally, has useful properties that could be used to generate novel photoactive proteins. Read more »
Self-Assembly of a Programmable DNA Lattice
The use of DNA for nanotechnology has gained interest because it is a highly “programmable” polymer with “sticky ends,” allowing the self-assembly of molecular scaffolds for other proteins and molecules. Their high-resolution structures will help map new routes toward the rational design of self-assembling 3D DNA crystals. Read more »
Two Basic Mechanisms of Cardiovascular Drugs
The structures of proteins controlling calcium-ion transport through cell membranes have been revealed, bound to two drugs known as calcium channel blockers. The discovery might accelerate the development of safer and more effective drugs for treating cardiovascular disorders such as high blood pressure, chest pain, and irregular heartbeat. Read more »
Evolutionary drivers of thermoadaptation in enzyme catalysis
With early life likely to have existed in a hot environment, enzymes had to cope with an inherent drop in catalytic speed caused by lowered temperature. Here, researchers characterize the molecular mechanisms underlying thermoadaptation of enzyme catalysis in adenylate kinase using ancestral sequence reconstruction spanning 3 billion years of evolution. Read more »
Molecular Switch Triggers Bacterial Pathogenicity
Using an array of high-powered x-ray imaging techniques at the ALS, scientists have revealed for the first time the molecular steps that turn on bacteria’s pathogenic genes. The study could open up new avenues in the development of drugs to prevent or treat bacterial infection. Read more »
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